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PROSITE entry PS51133

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ID   ZF_TFIIS_2; MATRIX.
AC   PS51133;
DT   01-JUN-2005 CREATED; 10-MAY-2017 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
DE   Zinc finger TFIIS-type profile.
MA   /GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=41;
MA   /DISJOINT: DEFINITION=PROTECT; N1=5; N2=37;
MA   /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=1.4266217; R2=0.0051143; TEXT='NScore';
MA   /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=4801.4287109; R2=1.2132797; PRIORITY=1; TEXT='Heuristic 5.0%';
MA   /CUT_OFF: LEVEL=0; SCORE=1384; H_SCORE=6481; N_SCORE=8.5; MODE=1; TEXT='!';
MA   /CUT_OFF: LEVEL=-1; SCORE=992; H_SCORE=6005; N_SCORE=6.5; MODE=1; TEXT='?';
MA   /DEFAULT: M0=-23; D=-20; I=-20; B1=-200; E1=-200; MI=-105; MD=-105; IM=-105; DM=-105;
MA   /I: B1=0; BI=-105; BD=-105;
MA   /M: SY='T'; M=-17,-49,11,4,-34,0,-14,14,-6,-25,-36,-22,-30,-19,5,33,36,3,-54,6;
MA   /M: SY='D'; M=-2,-52,51,20,-31,-11,-33,-44,13,-21,-8,31,-45,25,-2,0,-3,-41,-12,-6;
MA   /M: SY='W'; M=4,-52,-42,22,17,-52,33,28,13,-6,-30,-28,-48,-35,-1,-31,-3,10,53,6;
MA   /M: SY='K'; M=-26,-54,-32,29,-52,-41,-38,-9,46,-35,-39,11,35,26,8,-15,17,-3,-56,-45;
MA   /M: SY='C'; M=-79,157,-99,-99,-89,-94,-99,-96,-94,-86,-87,-85,-109,-102,-101,-81,-79,-83,-119,-100;
MA   /I: I=-6; MD=-32;
MA   /M: SY='P'; M=-33,-63,-34,3,-43,6,-43,-51,2,-48,-46,-42,95,-1,2,-16,-23,-34,-54,-11; D=-6;
MA   /I: I=-6; MI=-32; IM=-32; DM=-32;
MA   /M: SY='K'; M=3,-52,4,12,-35,-22,-34,-47,61,-42,-42,31,-44,11,25,-6,-30,-20,-54,-27;
MA   /I: I=-5; MI=0; MD=-25; IM=0; DM=-25;
MA   /M: SY='C'; M=-79,157,-99,-99,-89,-94,-99,-96,-94,-86,-87,-85,-109,-102,-101,-81,-79,-83,-119,-100;
MA   /M: SY='G'; M=-21,-54,1,-32,-57,65,44,-62,31,-58,-47,6,-27,2,-11,3,-22,-57,-56,-45;
MA   /M: SY='H'; M=-30,-32,-28,-16,-4,4,87,-55,16,-51,-41,54,-47,16,-30,31,-28,-54,-61,-24;
MA   /M: SY='N'; M=-29,-54,29,20,-53,-13,34,-41,27,-41,-7,40,7,-12,36,-6,-9,-44,-60,-30;
MA   /M: SY='E'; M=-38,-54,10,58,-28,1,-20,-54,37,-52,-22,38,-41,-7,16,-20,-4,-33,-58,-45;
MA   /M: SY='A'; M=57,40,-47,-44,-43,-18,-47,-16,-43,-12,39,-19,-47,-41,-47,-20,30,16,-57,-28;
MA   /M: SY='Y'; M=-6,-49,-48,-34,16,-51,24,1,-41,-11,1,-42,-52,-11,-12,5,19,41,23,53;
MA   /I: I=-6; MD=-29;
MA   /M: SY='F'; M=-43,-56,-56,-42,79,-55,-35,-34,-48,-29,-33,-52,24,-50,-34,-21,-28,-30,65,78; D=-6;
MA   /I: I=-6; MI=-29; MD=-29; IM=-29; DM=-29;
MA   /M: SY='F'; M=-28,-51,-53,-39,62,-54,22,-7,-21,1,37,-22,-55,-35,-11,-24,10,-1,62,36; D=-6;
MA   /I: I=-6; DM=-29;
MA   /M: SY='Q'; M=-36,-54,-34,18,-50,-47,-9,-3,-26,-11,38,-13,-44,89,-29,-4,30,-32,-54,-38;
MA   /M: SY='M'; M=5,-49,-31,-41,-23,-50,-42,19,4,37,48,-43,-12,4,2,11,-21,-2,-52,-36;
MA   /I: I=-6; MD=-32;
MA   /M: SY='Q'; M=-26,-62,-34,-15,-65,-46,23,-53,-19,-48,-10,-29,-1,113,-2,-28,-40,-55,-52,-38; D=-6;
MA   /I: I=-6; MI=-32; IM=-32; DM=-32;
MA   /M: SY='T'; M=-27,-45,-39,0,-41,-16,-44,24,-37,-1,9,-32,-42,16,-43,-7,78,-19,-59,-41;
MA   /M: SY='R'; M=-16,-59,-41,-29,-54,-16,-32,-59,25,-43,-42,-33,-51,-20,98,-37,-42,-52,-53,-41;
MA   /I: I=-5; MD=-27;
MA   /M: SY='S'; M=19,-19,-22,-14,-52,-16,-39,-17,-9,-50,-44,-29,-45,-28,27,73,-23,-26,-59,-45; D=-5;
MA   /I: I=-5; MI=-27; MD=-27; IM=-27; DM=-27;
MA   /M: SY='A'; M=71,-2,-43,-16,-54,18,-46,-33,-18,-39,-41,-37,-45,-36,-32,18,-23,-28,-55,-49; D=-5;
MA   /I: I=-5; DM=-27;
MA   /M: SY='D'; M=-45,-59,101,25,-59,-44,-31,-62,-32,-60,-58,-17,-44,-30,-41,-20,-23,-59,-71,0; D=-5;
MA   /I: I=-5; DM=-27;
MA   /M: SY='E'; M=-37,-56,-2,93,-58,-51,-32,-55,-10,-52,-48,9,-35,-15,-30,-32,12,-27,-60,-50;
MA   /M: SY='P'; M=7,-57,-39,1,-59,39,-44,-53,-39,-57,-18,-11,87,-38,-48,13,-20,-52,-56,-55;
MA   /M: SY='M'; M=-19,-50,-44,9,-40,-47,-35,-18,-37,0,98,-40,37,31,-39,13,-1,-31,-54,-37;
MA   /M: SY='T'; M=-11,-42,-39,-39,-43,-45,-45,-4,-35,-11,-34,-29,-41,-38,0,20,87,-12,-62,-42;
MA   /M: SY='V'; M=-37,-48,-53,-47,-31,-59,-50,35,-15,34,-19,-46,-52,-43,22,-30,31,43,-56,-37;
MA   /M: SY='F'; M=-38,-51,-59,-40,96,-59,-41,11,-28,-16,-1,-51,-60,-53,5,-49,-43,-17,-23,39;
MA   /M: SY='Y'; M=-15,14,-52,-52,51,-55,22,-21,-46,-24,-28,-49,-60,-44,-44,-43,-41,11,-17,101;
MA   /M: SY='V'; M=-14,-11,-33,-2,-14,-52,-44,4,30,-10,-15,-24,-47,-22,12,-16,36,40,-55,-9;
MA   /M: SY='C'; M=-79,157,-99,-99,-89,-94,-99,-96,-94,-86,-87,-85,-109,-102,-101,-81,-79,-83,-119,-100;
MA   /I: I=-5; MD=-27;
MA   /M: SY='C'; M=-5,56,-26,-19,-43,-49,-28,-13,14,2,3,-8,1,-19,-9,-8,43,8,-60,-23; D=-5;
MA   /I: I=-5; MI=0; MD=-27; IM=0; DM=-27;
MA   /M: SY='N'; M=-14,-52,34,24,-54,-20,33,-55,34,-52,-24,47,-44,-3,8,22,-18,-42,-61,-24;
MA   /M: SY='C'; M=-79,157,-99,-99,-89,-94,-99,-96,-94,-86,-87,-85,-109,-102,-101,-81,-79,-83,-119,-100;
MA   /I: I=-6; MD=-32;
MA   /M: SY='G'; M=-14,-54,-30,-16,-39,65,-25,-58,31,-45,-27,11,-46,21,-13,-1,-33,-54,-51,-9; D=-6;
MA   /I: I=-6; MI=-32; IM=-32; DM=-32;
MA   /M: SY='H'; M=-44,-55,-22,-2,25,-47,99,-51,35,-44,-36,26,-48,-7,-26,-19,-39,-52,-46,44;
MA   /M: SY='R'; M=-24,-55,-29,-15,-34,-49,22,-14,28,-20,-36,8,-48,32,62,-24,10,-14,40,-14;
MA   /M: SY='W'; M=-50,-65,-50,-2,56,-54,-57,-41,-46,-37,-12,-60,-55,-31,-36,-52,-22,-32,148,17;
MA   /M: SY='R'; M=-24,-52,-36,-8,-51,-48,-36,-15,47,-47,-40,-9,-45,-14,64,6,38,-22,-56,-42;
MA   /I: E1=0; IE=-105; DE=-105;
NR   /RELEASE=2024_02,571282;
NR   /TOTAL=65(65); /POSITIVE=65(65); /UNKNOWN=0(0); /FALSE_POS=0(0);
NR   /FALSE_NEG=0; /PARTIAL=0;
CC   /MATRIX_TYPE=protein_domain;
CC   /SCALING_DB=window20;
CC   /AUTHOR=N_Hulo;
CC   /TAXO-RANGE=A?E?V; /MAX-REPEAT=1;
CC   /FT_KEY=ZN_FING; /FT_DESC=TFIIS-type;
CC   /VERSION=5;
DR   Q6GZP4   , 081R_FRG3G , T; Q9ZVH8    , RDO2_ARATH , T; 
DR A0A7H0DN39, RP30_MONPV , T; O57187 , RP30_VACCA , T;
DR P21082 , RP30_VACCC , T; P21603 , RP30_VACCW , T;
DR P33796 , RP30_VAR67 , T; Q1RMP0 , RPA12_BOVIN, T;
DR Q9P1U0 , RPA12_HUMAN, T; Q5TM50 , RPA12_MACMU, T;
DR Q791N7 , RPA12_MOUSE, T; Q1XHV8 , RPA12_PANTR, T;
DR Q6MFY5 , RPA12_RAT , T; O94703 , RPA12_SCHPO, T;
DR P32529 , RPA12_YEAST, T; Q6NLH0 , RPB9A_ARATH, T;
DR Q8L5V0 , RPB9B_ARATH, T; Q32P73 , RPB9_BOVIN , T;
DR Q965S0 , RPB9_CAEEL , T; Q6FS48 , RPB9_CANGA , T;
DR P36958 , RPB9_DROME , T; Q8SQU1 , RPB9_ENCCU , T;
DR Q755B3 , RPB9_EREGS , T; P36954 , RPB9_HUMAN , T;
DR P60898 , RPB9_MOUSE , T; P60899 , RPB9_PIG , T;
DR O74635 , RPB9_SCHPO , T; P27999 , RPB9_YEAST , T;
DR Q2M2S7 , RPC10_BOVIN, T; Q9Y2Y1 , RPC10_HUMAN, T;
DR Q9CQZ7 , RPC10_MOUSE, T; O13896 , RPC10_SCHPO, T;
DR Q04307 , RPC10_YEAST, T; Q9J5C0 , RPO5_FOWPN , T;
DR Q29RL9 , TCEA1_BOVIN, T; Q54YG9 , TCEA1_DICDI, T;
DR P23193 , TCEA1_HUMAN, T; P10711 , TCEA1_MOUSE, T;
DR Q4KLL0 , TCEA1_RAT , T; Q148K0 , TCEA2_BOVIN, T;
DR Q15560 , TCEA2_HUMAN, T; Q9QVN7 , TCEA2_MOUSE, T;
DR Q63799 , TCEA2_RAT , T; Q2KI09 , TCEA3_BOVIN, T;
DR O75764 , TCEA3_HUMAN, T; P23881 , TCEA3_MOUSE, T;
DR P27948 , TFIIS_ASFB7, T; P0C8F5 , TFIIS_ASFK5, T;
DR P0C8F6 , TFIIS_ASFM2, T; P0C8F7 , TFIIS_ASFP4, T;
DR P0C8F8 , TFIIS_ASFWA, T; Q980K2 , TFS1_SACS2 , T;
DR P52652 , TFS2_CAEEL , T; P20232 , TFS2_DROME , T;
DR Q5UQS8 , TFS2_MIMIV , T; P49373 , TFS2_SCHPO , T;
DR P07273 , TFS2_YEAST , T; O29033 , TFS_ARCFU , T;
DR Q58548 , TFS_METJA , T; O27369 , TFS_METTH , T;
DR Q9P9I8 , TFS_METTL , T; Q07271 , TFS_SULAC , T;
DR Q56254 , TFS_THECE , T; Q197A5 , VF349_IIV3 , T;
DR Q91FH5 , VF349_IIV6 , T;
3D 1I3Q; 1I50; 1I6H; 1K83; 1NIK; 1NT9; 1PQV; 1QYP; 1R5U; 1R9S; 1R9T; 1SFO; 3D 1TFI; 1TWA; 1TWC; 1TWF; 1TWG; 1TWH; 1WCM; 1Y1V; 1Y1W; 1Y1Y; 1Y77; 2B63; 3D 2B8K; 2E2H; 2E2I; 2E2J; 2JA5; 2JA6; 2JA7; 2JA8; 2NVQ; 2NVT; 2NVX; 2NVY; 3D 2NVZ; 2R7Z; 2R92; 2R93; 2VUM; 2YU9; 3CQZ; 3FKI; 3GTG; 3GTJ; 3GTK; 3GTL; 3D 3GTM; 3GTO; 3GTP; 3GTQ; 3H0G; 3H3V; 3HOU; 3HOV; 3HOW; 3HOX; 3HOY; 3HOZ; 3D 3I4M; 3I4N; 3J0K; 3J1N; 3K1F; 3K7A; 3M3Y; 3M4O; 3PO2; 3PO3; 3QT1; 3RZD; 3D 3RZO; 3S14; 3S15; 3S16; 3S17; 3S1M; 3S1N; 3S1Q; 3S1R; 3S2D; 3S2H; 4A3B; 3D 4A3C; 4A3D; 4A3E; 4A3F; 4A3G; 4A3I; 4A3J; 4A3K; 4A3L; 4A3M; 4A93; 4BBR; 3D 4BBS; 4BXX; 4BXZ; 4BY1; 4BY7; 4C2M; 4C3H; 4C3I; 4C3J; 4V1M; 4V1N; 4V1O; 3D 4X67; 4X6A; 4Y52; 4Y7N; 4YM7; 5C3E; 5C44; 5C4A; 5C4J; 5C4X; 5FJ8; 5FJ9; 3D 5FJA; 5FLM; 5FMF; 5FYW; 5FZ5; 5G5L; 5IP7; 5IP9; 5IY6; 5IY7; 5IY8; 5IY9; 3D 5IYA; 5IYB; 5IYC; 5IYD; 5LMX; 5M3F; 5M3M; 5M5W; 5M5X; 5M5Y; 5M64; 5N5Y; 3D 5N5Z; 5N60; 5N61; 5OA1; 5OIK; 5OQJ; 5OQM; 5OT2; 5SVA; 5U0S; 5U5Q; 5VVR; 3D 5VVS; 5W4U; 5W51; 5W5Y; 5W64; 5W65; 5W66; 6BLO; 6BLP; 6BM2; 6BM4; 6BQF; 3D 6CNB; 6CNC; 6CND; 6CNF; 6DRD; 6EU0; 6EU1; 6EU2; 6EU3; 6EXV; 6F40; 6F41; 3D 6F42; 6F44; 6GMH; 6GML; 6GYK; 6GYL; 6GYM; 6H67; 6H68; 6HKO; 6HLQ; 6HLR; 3D 6HLS; 6I84; 6O6C; 6O9L; 6RIE; 6RQH; 6RQL; 6RQT; 6RRD; 6RUI; 6RUO; 6RWE; 3D 6TED; 6TPS; 6TUT; 6UPX; 6UPY; 6UPZ; 6UQ0; 6UQ1; 6UQ2; 6UQ3; 6XRE; 7A6H; 3D 7AE1; 7AE3; 7AEA; 7AOC; 7AOD; 7AOE; 7AST; 7B0Y; 7B7U; 7D58; 7D59; 7DN3; 3D 7DU2; 7EDX; 7EG7; 7EG8; 7EG9; 7EGA; 7EGB; 7EGC; 7ENA; 7ENC; 7EU0; 7EU1; 3D 7F4G; 7FJI; 7FJJ; 7KED; 7KEE; 7KEF; 7LBM; 7MEI; 7MK9; 7MKA; 7ML0; 7ML1; 3D 7ML2; 7ML4; 7NKX; 7NKY; 7NVR; 7NVS; 7NVT; 7NVU; 7NVY; 7NVZ; 7NW0; 7O4I; 3D 7O4J; 7O72; 7O73; 7O75; 7OB9; 7OBA; 7OBB; 7OKX; 7OKY; 7OL0; 7OO3; 7OOB; 3D 7OOP; 7OPC; 7OPD; 7OZN; 7OZO; 7OZP; 7PKS; 7RIM; 7RIP; 7RIQ; 7RIW; 7RIX; 3D 7RIY; 7UI9; 7UIF; 7UIO; 7UNC; 7UND; 7VBA; 7VBB; 7VBC; 7YCX; 7Z0H; 7Z1L; 3D 7Z1M; 7Z1O; 7Z2Z; 7Z30; 7Z31; 7ZS9; 7ZSA; 7ZSB; 7ZWD; 7ZX7; 7ZX8; 8A40; 3D 8A43; 8B3D; 8B3F; 8BVW; 8BWS; 8BYQ; 8BZ1; 8CEN; 8CEO; 8GXQ; 8GXS; 8HYJ; 3D 8ITY; 8IUE; 8IUH; 8OEU; 8OEV; 8OEW; 8OF0; 8P4A; 8P4B; 8P4C; 8P4D; 8P4E; 3D 8P4F; 8WAK; 8WAL; 8WAN; 8WAO; 8WAP; 8WAQ; 8WAR; 8WAS; 8WAT; 8WAU; 8WAV; 3D 8WAW; 8WAX; 8WAY; 8WAZ; 8WB0; PR PRU00472; DO PDOC00383; //