PROSITE entry PS00093
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General information about the entry
Entry name [info] | N4_MTASE |
Accession [info] | PS00093 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-JUN-1994 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00088 |
Name and characterization of the entry
Description [info] | N-4 cytosine-specific DNA methylases signature. |
Pattern [info] |
[LIVMF]-T-S-P-P-[FY]. |
Numerical results [info]
Total number of hits | 33 in 33 different sequences |
Number of true positive hits | 20 in 20 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 13 in 13 different sequences |
Number of false negative sequences | 0 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 60.61 % |
Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
Taxonomic range [info] | Archaea, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
20 sequences
MTA1_ANAVA (P0A462), MTA1_NOSS1 (P0A461), MTB1_BACSQ (Q9LAI2), MTB1_GEOSE (P70986), MTB2_BACAM (P18051), MTB2_BACIU (Q45489), MTC1_CITFR (Q04845), MTC9_CITFR (P14243), MTHZ_METTF (P29568), MTM1_METJA (Q58392), MTM2_METJA (Q58843), MTM5_METJA (Q58893), MTM6_METJA (Q58606), MTMV_KOCVA (P14244), MTMW_METWO (O59647), MTP2_PROHU (P11409), MTS1_STRCS (O52692), MTS1_STRFI (O52513), MTSM_SERMA (P14230), MTX1_XANCC (P30774)» more
|
UniProtKB/Swiss-Prot False positive sequences |
13 sequences
CABIN_HUMAN (Q9Y6J0), CABIN_RAT (O88480), DEF45_ARATH (Q2V3Y8), GSH1_ONCVO (Q9NFN6), MORN1_RAT (Q641X6), POLN_ONNVG (P13886), POLN_ONNVI (O90370), POLN_ONNVS (O90368), RAD16_SCHPO (P36617), SMKX_MOUSE (Q8C0X8), WNK1_MOUSE (P83741), Y1558_DICDI (Q1ZXI5), Y1671_HAEIN (P44287)» more |
PDB [Detailed view] |
1 PDB
1BOO |