PROSITE entry PS00140
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General information about the entry
| Entry name [info] | UCH_1 |
| Accession [info] | PS00140 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-NOV-1997 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00127 |
| Associated ProRule [info] | PRU10091 |
Name and characterization of the entry
| Description [info] | Ubiquitin carboxyl-terminal hydrolase family 1 cysteine active-site. |
| Pattern [info] |
Q-x(3)-N-[SA]-C-G-x(3)-[LIVM](2)-H-[SA]-[LIVM]-[SA]. |
Numerical results [info]
| Total number of hits | 17 in 17 different sequences |
| Number of true positive hits | 17 in 17 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 29 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 36.96 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 5 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
17 sequences
UBL1_YEAST (P35127), UBLH1_SCHPO (Q10171), UCHL1_BOVIN (P23356), UCHL1_HORSE (Q9GM50), UCHL1_HUMAN (P09936), UCHL1_MACFA (Q60HC8), UCHL1_MONDO (P50103), UCHL1_MOUSE (Q9R0P9), UCHL1_PIG (Q6SEG5), UCHL1_RAT (Q00981), UCHL3_BOVIN (Q2TBG8), UCHL3_HUMAN (P15374), UCHL3_MOUSE (Q9JKB1), UCHL3_PIG (Q06AB3), UCHL3_RAT (Q91Y78), UCHL_APLCA (O01391), UCHL_DROME (P35122)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
29 sequences
BAP1_BOVIN (A2VDM8), BAP1_BRAFL (C4A0D9), BAP1_CHICK (Q5F3N6), BAP1_DANRE (A1L2G3), BAP1_HUMAN (Q92560), BAP1_MOUSE (Q99PU7), BAP1_RAT(D3ZHS6), BAP1_XENLA (Q52L14), BAP1_XENTR (Q66JB6), CALYP_AEDAE (Q17N72), CALYP_CULQU (B0W2R4), CALYP_DROAN (B3MIV9), CALYP_DROER (B3NPV7), CALYP_DROGR (B4JW98), CALYP_DROME (Q7K5N4), CALYP_DROMO (B4KT51), CALYP_DROPE (B4GAM2), CALYP_DROPS (Q291J4), CALYP_DROSE (B4HST0), CALYP_DROSI (B4QHH0), CALYP_DROVI (B4LQ24), CALYP_DROYA (B4P6P6), UBH4_CAEEL (Q09444), UBLH2_SCHPO (Q9UUB6), UCHL4_MOUSE (P58321), UCHL5_BOVIN (Q9XSJ0), UCHL5_DICDI (Q54N38), UCHL5_HUMAN (Q9Y5K5), UCHL5_MOUSE (Q9WUP7)» more |
| PDB [Detailed view] |
18 PDB
1CMX; 1UCH; 1XD3; 2ETL; 2LEN; 3IFW; 3IRT; 3KVF; 3KW5; 4DM9; 4JKJ; 6ISU; 6QML; 7EN4; 7YV4; 7ZM0; 8DY8; 8EDE » more |