PROSITE entry PS00269
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General information about the entry
Entry name [info] | DEFENSIN |
Accession [info] | PS00269 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-OCT-1993 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00242 |
Name and characterization of the entry
Description [info] | Mammalian defensins signature. |
Pattern [info] |
C-x-C-x(3,5)-C-x(7)-G-x-C-x(9)-C-C. |
Numerical results [info]
Total number of hits | 60 in 60 different sequences |
Number of true positive hits | 59 in 59 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 12 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 98.33 % |
Recall (true positives / (true positives + false negatives)) | 83.10 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 3 |
Site [info] | disulfide at position 5 |
Site [info] | disulfide at position 9 |
Site [info] | disulfide at position 11 |
Site [info] | disulfide at position 12 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
59 sequences
DEF1A_CAVPO (P11478), DEF1B_CAVPO (Q64365), DEF1_HUMAN (P59665), DEF1_MACMU (P60030), DEF1_MESAU (P81465), DEF1_PANTR (Q5G863), DEF1_PAPHA (P84757), DEF1_RABIT (P07469), DEF1_RAT(Q62716), DEF2_CAVPO (P49112), DEF2_MACMU (P82317), DEF2_MESAU (P81466), DEF2_RABIT (P07468), DEF2_RAT(Q62715), DEF3A_RAT (Q62713), DEF3B_RAT (Q9Z1F1), DEF3_HUMAN (P59666), DEF3_MACMU (P60031), DEF3_MESAU (P81467), DEF3_PAPHA (P84758), DEF3_RABIT (P01376), DEF4_HUMAN (P12838), DEF4_MACMU (P82319), DEF4_MESAU (P81468), DEF4_PANTR (Q5G862), DEF4_PAPHA (P86724), DEF4_RABIT (P01377), DEF4_RAT(Q62714), DEF5_HUMAN (Q01523), DEF5_PANTR (Q5G861), DEF5_RABIT (P07467), DEF5_RAT(P82106), DEF6_HUMAN (Q01524), DEF6_MACMU (P82320), DEF6_PANTR (Q5G860), DEF6_RABIT (P07466), DEF7_RABIT (P80223), DEF8_MACMU (P60032), DEFA1_MOUSE (P11477), DEFA1_ORNAN (P0C8A1), DEFA2_MOUSE (P28309), DEFA2_ORNAN (P0C8A2), DEFA3_MOUSE (P28310), DEFA3_ORNAN (P0C8A3), DEFA5_MOUSE (P28312), DEFA6_MOUSE (P50704), DEFA7_MOUSE (P50705), DEFA8_MOUSE (P50706), DEFA9_MOUSE (P50707), DFA10_MOUSE (P50708), DFA11_MOUSE (P50709), DFA13_MOUSE (P50711), DFA14_MOUSE (P50712), DFA15_MOUSE (P50713), DFA16_MOUSE (P50714), DFA17_MOUSE (Q64016), DFA23_MOUSE (Q5G866), DFA24_MOUSE (Q5G865), DFA26_MOUSE (Q3L180)» more
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UniProtKB/Swiss-Prot False negative sequences |
12 sequences
BTDA_PAPAN (B6ULW4), BTDB_PAPAN (B6ULW5), BTDC_PAPAN (B6ULW6), BTDD_PAPAN (B6ULW7), DEF7_PANTR (Q5G859), DEFA1_HORSE (A6YB85), DEFA4_MOUSE (P28311), DEFA4_ORNAN (P0C8A4), RK1_RABIT (P81655), RTD1A_MACMU (P82270), RTD1B_MACMU (P82271), RTD3_MACMU (Q9GLR2)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
BTDA_PAPHA (P86722), BTDB_PAPHA (P86723) |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
KRUC_SHEEP (P26372) |
PDB [Detailed view] |
39 PDB
1DFN; 1ZMM; 1ZMP; 1ZMQ; 2KHT; 2LXZ; 2MIT; 2PM1; 2PM4; 2PM5; 3GNY; 3H6C; 3HJ2; 3HJD; 3I5W; 3LO1; 3LO2; 3LO4; 3LO6; 3LO9; 3LOE; 3LVX; 3QTE; 4E82; 4E83; 4E86; 4LB1; 4LB7; 4LBB; 4LBF; 4RBW; 4RBX; 5CUI; 5CUJ; 5CUM; 6DMM; 6DMQ; 6KRA; 7YOA » more |