PROSITE entry PS00288
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General information about the entry
Entry name [info] | TIMP |
Accession [info] | PS00288 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-JUL-1999 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00260 |
Name and characterization of the entry
Description [info] | Tissue inhibitors of metalloproteinases signature. |
Pattern [info] |
C-x-C-x-P-x-H-P-Q-x(2)-[FIV]-C. |
Numerical results [info]
Total number of hits | 33 in 33 different sequences |
Number of true positive hits | 33 in 33 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 4 |
Number of 'partial' sequences | 2 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 89.19 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | disulfide at position 1 |
Site [info] | disulfide at position 3 |
Site [info] | disulfide at position 12 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
33 sequences
TIMP1_BOVIN (P20414), TIMP1_HORSE (O02722), TIMP1_HUMAN (P01033), TIMP1_MOUSE (P12032), TIMP1_PAPCY (P49061), TIMP1_PIG (P35624), TIMP1_PONAB (Q5RC60), TIMP1_RABIT (P20614), TIMP1_RAT (P30120), TIMP1_SHEEP (P50122), TIMP2_BOVIN (P16368), TIMP2_CANLF (Q9TTY1), TIMP2_CAVPO (Q9WUC6), TIMP2_CHICK (O42146), TIMP2_CRILO (Q60453), TIMP2_HUMAN (P16035), TIMP2_MOUSE (P25785), TIMP2_RABIT (Q9TRZ7), TIMP2_RAT (P30121), TIMP3_BOVIN (P79121), TIMP3_CHICK (P26652), TIMP3_HORSE (Q9TUL9), TIMP3_HUMAN (P35625), TIMP3_MACFA (P61269), TIMP3_MACMU (Q5PXZ9), TIMP3_MOUSE (P39876), TIMP3_RAT (P48032), TIMP3_SCYTO (Q9W6B4), TIMP3_XENLA (O73746), TIMP4_BOVIN (O97563), TIMP4_HUMAN (Q99727), TIMP4_MOUSE (Q9JHB3), TIMP4_RAT (P81556)» more
|
UniProtKB/Swiss-Prot False negative sequences |
4 sequences
TIMP1_CANLF (P81546), TIMP1_MACMU (Q95KL9), TIMPL_CAEEL (Q21265), TIMP_DROME (Q9VH14)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
2 sequences
TIMP3_RABIT (O97590), TIMP4_RABIT (O97591) |
PDB [Detailed view] |
18 PDB
1BQQ; 1BR9; 1BUV; 1D2B; 1GXD; 1OO9; 1UEA; 2E2D; 2J0T; 2TMP; 3CKI; 3MA2; 3V96; 4ILW; 6MAV; 6N9D; 7S7L; 7S7M » more |