PROSITE entry PS00845

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General information about the entry

Entry name [info]	CAP_GLY_1
Accession [info]	PS00845
Entry type [info]	PATTERN
Date [info]	01-OCT-1993 CREATED; 01-APR-2006 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00660

Name and characterization of the entry

Description [info]	CAP-Gly domain signature.
Pattern [info]	[GD]-x(0,10)-[FYWA]-x(0,1)-G-[LIVM]-x(0,2)-[LIVMFYD]-x(0,7)-G-[KN]-[NHW]- x(0,1)-G-[STARCV]-x(0,2)-[GD]-x(0,2)-[LY]-[FC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.

Total number of hits	68 in 54 different sequences
Number of true positive hits	67 in 53 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	2
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	98.53 %
Recall (true positives / (true positives + false negatives))	97.10 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	2
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	53 sequences ALP11_SCHPO (Q10235), BIK1_YEAST (P11709), CE350_HUMAN (Q5VT06), CE350_MOUSE (E9Q309), CL190_DROME (Q9VJE5), CLIP1_CHICK (O42184), CLIP1_HUMAN (P30622), CLIP1_MOUSE (Q922J3), CLIP1_RAT (Q9JK25), CLIP2_HUMAN (Q9UDT6), CLIP2_MOUSE (Q9Z0H8), CLIP2_RAT (O55156), CLIP3_HUMAN (Q96DZ5), CLIP3_MOUSE (B9EHT4), CLIP3_PONAB (Q5R686), CLIP3_XENLA (Q5U243), CLIP4_HUMAN (Q8N3C7), CLIP4_MOUSE (Q8CI96), CLIP4_RAT (Q66HD5), CLP1H_CAEEL (P34531), CYLD_BOVIN (Q1RMU2), CYLD_HUMAN (Q9NQC7), CYLD_MOUSE (Q80TQ2), CYLD_PONAB (Q5RED8), CYLD_RAT(Q66H62), DCTN1_CHICK (P35458), DCTN1_DROME (P13496), DCTN1_HUMAN (Q14203), DCTN1_MOUSE (O08788), DCTN1_PIG (A0A287B8J2), DCTN1_RAT (P28023), DCTN1_XENLA (Q6PCJ1), DYNA_NEUCR (Q01397), KI13B_HUMAN (Q9NQT8), NIP80_YEAST (P33420), PAC2_YEAST (P39937), SSM4_SCHPO (O42667), TBCB_BOVIN (Q5E951), TBCB_CAEEL (Q20728), TBCB_DICDI (Q54Z01), TBCB_HUMAN (Q99426), TBCB_MOUSE (Q9D1E6), TBCB_YEAST (P53904), TBCE_ARATH (Q8GRL7), TBCE_BOVIN (Q32KS0), TBCE_DANRE (Q5U378), TBCE_DICDI (Q55CN0), TBCE_HUMAN (Q15813), TBCE_MOUSE (Q8CIV8), TBCE_PONAB (Q5RBD9), TBCE_RAT(Q5FVQ9), TBCE_XENLA (Q5U508), TIP1_SCHPO (P79065) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	2 sequences TBCB_ARATH (Q67Z52), TBCE_DROME (A1Z6J5)
UniProtKB/Swiss-Prot False positive sequences	1 sequence YETA_BACSU (O31530)
PDB [Detailed view]	35 PDB 1LPL; 1TOV; 1TXQ; 1WHG; 1WHH; 1WHK; 1WHM; 2COW; 2COY; 2COZ; 2CP0; 2CP2; 2CP3; 2CP5; 2CP6; 2CP7; 2E3H; 2E3I; 2E4H; 2HKN; 2HKQ; 2HL3; 2HL5; 2HQH; 2M02; 2MPX; 2QK0; 2Z0W; 3E2U; 3RDV; 3TQ7; 6FC5; 6FC6; 6ZNL; 7Z8F » more