PROSITE entry PS00929

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	PIR_REPEAT_1
Accession [info]	PS00929
Entry type [info]	PATTERN
Date [info]	01-OCT-1993 CREATED; 01-DEC-2001 DATA UPDATE; 27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00718

Name and characterization of the entry

Description [info]	Yeast PIR proteins repeats signature.
Pattern [info]	S-Q-[IV]-[STGNH]-D-G-Q-[LIV]-Q-[AIV]-[STA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.

Total number of hits	108 in 21 different sequences
Number of true positive hits	108 in 21 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	1
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	99.08 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	13
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

21 sequences

ANS1_YEAST  (P38832), CIS3_YEAS6  (B5VL27), CIS3_YEAS7  (A6ZQH4),

CIS3_YEAST  (P47001), CWP2_YEAST  (P43497), HS150_YEAS1 (B3LPW4), 
HS150_YEAS6 (B5VL26), HS150_YEAS7 (A6ZQH3), HS150_YEAST (P32478), 
PIR1_YEAS1  (B3LQU0), PIR1_YEAS7  (A6ZZG0), PIR1_YEAST  (Q03178), 
PIR3_YEAS1  (B3LQU1), PIR3_YEAS7  (A6ZZG1), PIR3_YEAST  (Q03180), 
PIR5_YEAS1  (B3LPW3), PIR5_YEAS6  (B5VL25), PIR5_YEAS7  (A6ZQH2), 
PIR5_YEAST  (P46999), TIR1_YEAST  (P10863), TIR2_YEAST  (P33890)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

1 sequence

CWP1_YEAST  (P28319)