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PROSITE entry PS01236


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General information about the entry

Entry name [info] PDXT_SNO_1
Accession [info] PS01236
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-APR-2006 DATA UPDATE;
27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00950

Name and characterization of the entry

Description [info] PdxT/SNO family family signature.
Pattern [info]
[GARVS]-[LVI]-[ILAV]-[LIVF]-P-G-G-E-S-[TS]-[STAV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.


Total number of hits 241 in 241 different sequences
Number of true positive hits 241 in 241 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.63 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
241 sequences

PDX2_ARATH  (Q8LAD0), PDX2_DICDI  (Q54J48), PDX2_PLABE  (Q4PJX5), 
PDX2_PLAF7  (Q8IIK4), PDXT_ACIC1  (A0LUK9), PDXT_ACTP2  (A3MZT9), 
PDXT_ACTP7  (B3GXB7), PDXT_ACTPJ  (B0BUD1), PDXT_AERPE  (Q9YFK4), 
PDXT_ANOFW  (B7GFL9), PDXT_ARCFU  (O29741), PDXT_ARTS2  (A0JXB5), 
PDXT_AZOPC  (B6YQU3), PDXT_BACAA  (C3P8Q4), PDXT_BACAC  (C3LIY8), 
PDXT_BACAH  (A0R890), PDXT_BACAN  (Q81W26), PDXT_BACC0  (B7JJC7), 
PDXT_BACC1  (Q73FJ4), PDXT_BACC2  (B7IS30), PDXT_BACC3  (C1ES18), 
PDXT_BACC4  (B7HII4), PDXT_BACC7  (B7HPS7), PDXT_BACCN  (A7GJS9), 
PDXT_BACCQ  (B9IYH9), PDXT_BACCR  (Q81JC5), PDXT_BACCZ  (Q63HF7), 
PDXT_BACHK  (Q6HQ04), PDXT_BACLD  (Q65PL1), PDXT_BACMK  (A9VMA0), 
PDXT_BACP2  (A8FAD6), PDXT_BACSU  (P37528), PDXT_BACVZ  (A7Z0D4), 
PDXT_BIFAA  (A1A3A4), PDXT_BIFLO  (Q8G575), PDXT_BREBN  (C0ZH53), 
PDXT_CALBD  (B9MKY8), PDXT_CALMQ  (A8MAY1), PDXT_CALS4  (Q8RBJ4), 
PDXT_CALS8  (A4XIB6), PDXT_CARHZ  (Q3A8Q0), PDXT_CENSY  (A0RTP4), 
PDXT_CHLAA  (A9WFU0), PDXT_CHLSY  (B9LIK4), PDXT_CLAM3  (A5CS10), 
PDXT_CLAMS  (B0REB6), PDXT_CLOAB  (Q97LG6), PDXT_CLOB8  (A6M3G5), 
PDXT_CLOBM  (B1KYX4), PDXT_CLOK1  (B9E3V5), PDXT_CLOK5  (A5MZY0), 
PDXT_CORDI  (Q6NK10), PDXT_CORGB  (A4QCC4), PDXT_CORGL  (Q8NS90), 
PDXT_CUTAK  (Q6A947), PDXT_DEHM1  (Q3Z8V9), PDXT_DEHMB  (A5FRL6), 
PDXT_DEHMC  (Q3ZX06), PDXT_DEIGD  (Q1IZC9), PDXT_DEIRA  (Q9RUL8), 
PDXT_DESAP  (B1I158), PDXT_DESHD  (B8FZR4), PDXT_DESHY  (Q24PK8), 
PDXT_DESRM  (A4J0G0), PDXT_DICT6  (B5YF84), PDXT_DICTD  (B8E120), 
PDXT_EXIS2  (B1YGC2), PDXT_FERNB  (A7HNV0), PDXT_FRAAA  (Q0RNV0), 
PDXT_FRACC  (Q2JD98), PDXT_FRAP2  (B0TZ16), PDXT_FRASN  (A8KZF0), 
PDXT_FRAT1  (Q14IU7), PDXT_FRATF  (A7NDQ2), PDXT_FRATH  (Q2A261), 
PDXT_FRATM  (B2SDL4), PDXT_FRATN  (A0Q5I2), PDXT_FRATO  (Q0BKT3), 
PDXT_FRATT  (Q5NHE5), PDXT_FRATW  (A4IZB4), PDXT_GEOKA  (Q5L3Y1), 
PDXT_GEOSE  (P83813), PDXT_GEOSW  (C5D338), PDXT_GEOTN  (A4IJ95), 
PDXT_HAEDU  (Q7VL87), PDXT_HAEI8  (Q4QJU4), PDXT_HAEIE  (A5UBN1), 
PDXT_HAEIG  (A5UF87), PDXT_HAEIN  (P45294), PDXT_HALH5  (Q9KGN5), 
PDXT_HALMA  (Q5UZW7), PDXT_HALS3  (B0R879), PDXT_HALSA  (Q9HMD2), 
PDXT_HALWD  (Q18KL6), PDXT_HERA2  (A9B890), PDXT_HYPBU  (A2BLL6), 
PDXT_IGNH4  (A8A8T7), PDXT_KINRD  (A6WCI3), PDXT_KORCO  (B1L4Z3), 
PDXT_KORVE  (Q1IQH8), PDXT_LEIXX  (Q6AFB8), PDXT_LISIN  (Q929R8), 
PDXT_LISMC  (C1KX54), PDXT_LISMF  (Q71XR2), PDXT_LISMH  (B8DH16), 
PDXT_LISMO  (Q8Y5G1), PDXT_LISW6  (A0AKK9), PDXT_META3  (A6UWZ3), 
PDXT_METAC  (Q8TQH7), PDXT_METAR  (Q0W8A8), PDXT_METB6  (A7I472), 
PDXT_METBF  (Q465J4), PDXT_METBU  (Q12YR6), PDXT_METHJ  (Q2FTH1), 
PDXT_METJA  (Q59055), PDXT_METKA  (Q8TWH2), PDXT_METLZ  (A2SPK0), 
PDXT_METM5  (A4G0R6), PDXT_METM6  (A9A909), PDXT_METM7  (A6VHR9), 
PDXT_METMA  (Q8PUA4), PDXT_METMJ  (A3CRE5), PDXT_METMP  (P0C036), 
PDXT_METPE  (B8GE19), PDXT_METS5  (A4YI12), PDXT_METTP  (A0B7N4), 
PDXT_METVS  (A6UQT7), PDXT_MOOTA  (Q2RMI9), PDXT_MYCA1  (A0QIC6), 
PDXT_MYCA9  (B1MCJ8), PDXT_MYCBO  (Q7TY92), PDXT_MYCBP  (A1KLV4), 
PDXT_MYCBT  (C1AF75), PDXT_MYCLE  (Q9CCT5), PDXT_MYCMM  (B2HN48), 
PDXT_MYCPA  (Q73WF2), PDXT_MYCS2  (A0QWH0), PDXT_MYCSJ  (A3PYU8), 
PDXT_MYCSK  (A1UF87), PDXT_MYCSS  (Q1B9S6), PDXT_MYCTA  (A5U5V5), 
PDXT_MYCTO  (P9WII6), PDXT_MYCTU  (P9WII7), PDXT_MYCUA  (A0PSY6), 
PDXT_MYCVP  (A1T876), PDXT_NIACI  (Q8L1A7), PDXT_NITMS  (A9A4S0), 
PDXT_NOCFA  (Q5YTE0), PDXT_NOCSJ  (A1SJA2), PDXT_OCEIH  (Q8EN04), 
PDXT_OENOB  (Q04F27), PDXT_PAEAT  (A1R728), PDXT_PARUW  (Q6MEN7), 
PDXT_PASMU  (Q9CLJ5), PDXT_PELTS  (A5D6D2), PDXT_PICTO  (Q6L1R3), 
PDXT_PSECP  (B8H9E0), PDXT_PSELT  (A8F840), PDXT_PYRAB  (Q9V0J6), 
PDXT_PYRAE  (Q8ZUE9), PDXT_PYRAR  (A4WHH5), PDXT_PYRFU  (Q8TH23), 
PDXT_PYRHO  (O59079), PDXT_PYRNV  (B1YB90), PDXT_RENSM  (A9WSE8), 
PDXT_RHOJR  (Q0S1D2), PDXT_RHOOB  (C1B4C5), PDXT_ROSCS  (A7NQB7), 
PDXT_ROSS1  (A5UY93), PDXT_RUBXD  (Q1AWE7), PDXT_RUMCH  (B8I364), 
PDXT_SACEN  (A4FBA2), PDXT_SACS2  (Q9UWX4), PDXT_SALAI  (A8LWZ5), 
PDXT_SALTO  (A4X5V4), PDXT_SHOC1  (Q5WKW1), PDXT_SOLUE  (Q02CB5), 
PDXT_STAA1  (A7WYT2), PDXT_STAA2  (A6TYZ6), PDXT_STAA3  (Q2FJC0), 
PDXT_STAA8  (Q2G0Q0), PDXT_STAA9  (A5IQ73), PDXT_STAAB  (Q2YSE1), 
PDXT_STAAC  (Q5HIF4), PDXT_STAAE  (A6QEH2), PDXT_STAAM  (Q99W83), 
PDXT_STAAN  (Q7A7A1), PDXT_STAAR  (Q6GJE9), PDXT_STAAS  (Q6GBW8), 
PDXT_STAAT  (A8YZL6), PDXT_STAAW  (Q7A1R6), PDXT_STACT  (B9DKX8), 
PDXT_STAEQ  (Q5HRN4), PDXT_STAES  (Q8CQV8), PDXT_STAHJ  (Q4L3H9), 
PDXT_STAMF  (A3DM32), PDXT_STAS1  (Q49V29), PDXT_STRAW  (Q81ZV5), 
PDXT_STRCO  (Q9L287), PDXT_STRGG  (B1W3G0), PDXT_STRP2  (Q04JN6), 
PDXT_STRP4  (B5E5W0), PDXT_STRP7  (C1C862), PDXT_STRPI  (B1ICP8), 
PDXT_STRPJ  (B8ZL13), PDXT_STRPN  (Q97PX3), PDXT_STRPS  (B2IQT4), 
PDXT_STRR6  (Q8DP72), PDXT_STRZJ  (C1CF49), PDXT_STRZP  (C1CLG6), 
PDXT_STRZT  (C1CQQ1), PDXT_SULAC  (Q4J8L2), PDXT_SULIA  (C3N6C7), 
PDXT_SULIK  (C4KHU2), PDXT_SULIL  (C3MQK7), PDXT_SULIM  (C3MW85), 
PDXT_SULIN  (C3NGV9), PDXT_SULIY  (C3NET5), PDXT_SULTO  (Q971B2), 
PDXT_THEAB  (B7IEZ6), PDXT_THEAC  (Q9HM60), PDXT_THEFY  (Q47N39), 
PDXT_THEGJ  (C5A4H0), PDXT_THEKO  (Q5JFR2), PDXT_THEM4  (A6LP41), 
PDXT_THEMA  (Q9WYU3), PDXT_THENN  (B9KBI1), PDXT_THEON  (B6YVQ8), 
PDXT_THEP1  (A5IJU9), PDXT_THEP3  (B0KAS0), PDXT_THEPX  (B0K4N6), 
PDXT_THESQ  (B1L921), PDXT_THET2  (Q72KF8), PDXT_THET8  (Q5SKD6), 
PDXT_THEVO  (Q97CP5), PDXT_TROW8  (Q83HM6), PDXT_TROWT  (Q83GK3), 
SNO1_YEAST  (Q03144), SNO2_YEAST  (P53823), SNO3_YEAST  (P43544), 
YFM8_SCHPO  (Q9UTE4)
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

PDXT_CHLAD  (B8G664), PDXT_CORJK  (Q4JVD5), PDXT_HALLT  (B9LSC8), 
PDXT_KOSOT  (C5CG73), PDXT_METS3  (A5UK48), PDXT_METST  (Q2NGI4), 
PDXT_METTH  (O26292), PDXT_NATPD  (Q3IU60), PDXT_PYRCJ  (A3MSM9), 
PDXT_PYRIL  (A1RU67), PDXT_SYNAS  (Q2LXR3)
» more

PDB
[Detailed view]
10 PDB

1Q7R; 1R9G; 2ABW; 2ISS; 2NV0; 2NV2; 2YWD; 2YWJ; 4ADS; 4WXY