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PROSITE entry PS01189


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General information about the entry

Entry name [info] RIBOSOMAL_S12E
Accession [info] PS01189
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE;
27-MAR-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00915

Name and characterization of the entry

Description [info] Ribosomal protein S12e signature.
Pattern [info] 
[SA]-[LI]-[KREQP]-x(2)-[LIVM]-x(2)-[SA]-x(3)-[DNG]-G-[LIV]-x(2)-G-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_02 which contains 571'282 sequence entries.


Total number of hits 24 in 24 different sequences
Number of true positive hits 22 in 22 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 91.67 %
Recall (true positives / (true positives + false negatives)) 95.65 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 22 sequences 

RS121_ARATH (Q9S9P1), RS122_ARATH (Q9SKZ3), RS12A_SCHPO (O14062), 

RS12B_SCHPO (O74322), RS12_BLUHO  (O59936), RS12_BOVIN  (Q76I81), 
RS12_CAEEL  (P49196), RS12_CANAL  (Q5ADQ6), RS12_CHICK  (P84175), 
RS12_CYAPA  (Q9SMI3), RS12_DROME  (P80455), RS12_HORVU  (Q9XHS0), 
RS12_HUMAN  (P25398), RS12_MOUSE  (P63323), RS12_ORENI  (O13019), 
RS12_PIG(P46405), RS12_PLAF7  (O97249), RS12_RABIT  (G1SFR8), 
RS12_RAT(P63324), RS12_TRYBB  (Q03253), RS12_XENLA  (P47840), 
RS12_YEAST  (P48589)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

RS12_DICDI  (Q54PX9)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
PLEK2_HUMAN (Q9NYT0), PLEK2_MOUSE (Q9WV52)


				
	

	

		PDB
[Detailed view]		
		
			278 PDB
			


			3J6X; 3J6Y; 3J77; 3J78; 3J7A; 3J7R; 3JAG; 3JAH; 3JAI; 3JBN; 3JBO; 3JBP; 
			
				4D5L; 4D61; 4KZX; 4KZY; 4KZZ; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 
				4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4V6W; 4V6X; 
				4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 
				5FCJ; 5FLX; 5I4L; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5K0Y; 5LKS; 5LYB; 5LZS; 
				5LZT; 5LZU; 5LZV; 5LZW; 5LZX; 5LZY; 5LZZ; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 
				5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5VYC; 5WYJ; 6D90; 6D9J; 
				6EML; 6FAI; 6FEC; 6G18; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6GZ3; 
				6HCF; 6HCJ; 6HCM; 6HCQ; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQU; 
				6MTB; 6MTC; 6MTD; 6MTE; 6OKK; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 
				6P4G; 6P4H; 6P5I; 6P5J; 6P5K; 6P5N; 6Q8Y; 6QZP; 6R5Q; 6R6G; 6R6P; 6R7Q; 
				6RBD; 6RBE; 6S47; 6SGC; 6SNT; 6SV4; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TNU; 
				6W2S; 6W2T; 6WDR; 6WOO; 6XA1; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y57; 6Y7C; 6YAL; 
				6YAM; 6YAN; 6YBS; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 
				6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOL; 6ZON; 6ZP4; 6ZU9; 6ZUO; 6ZV6; 
				6ZVH; 6ZVI; 6ZVJ; 6ZVK; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A01; 7A09; 7A1G; 
				7B7D; 7D5S; 7JQB; 7JQC; 7K5I; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 7MQ8; 7MQ9; 
				7MQA; 7N8B; 7NRC; 7NRD; 7NWG; 7NWH; 7NWI; 7O7Y; 7O7Z; 7O80; 7O81; 7PZY; 
				7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QP6; 7QP7; 7R4X; 7SYG; 7SYH; 7SYI; 7SYJ; 
				7SYK; 7SYL; 7SYM; 7SYN; 7SYO; 7SYP; 7SYQ; 7SYR; 7SYS; 7SYT; 7SYU; 7SYV; 
				7SYW; 7SYX; 7TOQ; 7TOR; 7TQL; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 
				7XNX; 7XNY; 7ZJW; 7ZJX; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8BHF; 8BQD; 8BQX; 
				8BTK; 8CAH; 8CAS; 8CBJ; 8G5Y; 8G60; 8G61; 8G6J; 8GLP; 8OVA; 8P2K; 8PPK; 
				8PPL; 8T4S
			
			

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