PROSITE entry PS00326
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General information about the entry
Entry name [info] | TROPOMYOSIN |
Accession [info] | PS00326 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00290 |
Name and characterization of the entry
Description [info] | Tropomyosins signature. |
Pattern [info] |
L-K-[EAD]-A-E-x-R-A-[ET]. |
Numerical results [info]
Total number of hits | 79 in 79 different sequences |
Number of true positive hits | 79 in 79 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 11 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 87.78 % |
Comments [info]
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
79 sequences
TPM01_PERAM (P0DSM6), TPM02_PERAM (P0DSM7), TPM03_CRAGI (Q95WY0), TPM03_PERAM (C5J049), TPM1_BIOGL (P42636), TPM1_BOMMO (Q1HPU0), TPM1_BOVIN (Q5KR49), TPM1_CAEEL (Q22866), TPM1_CHEAU (P84335), TPM1_CHICK (P04268), TPM1_COTJA (P58773), TPM1_DANRE (P13104), TPM1_DROME (P06754), TPM1_HUMAN (P09493), TPM1_MOUSE (P58771), TPM1_PIG(P42639), TPM1_RABIT (P58772), TPM1_RANTE (P13105), TPM1_RAT(P04692), TPM1_SCHMA (P42637), TPM1_XENLA (Q01173), TPM2_BIOGL (P43689), TPM2_BOMMO (Q1HPQ0), TPM2_BOVIN (Q5KR48), TPM2_CHICK (P19352), TPM2_DROME (P09491), TPM2_HUMAN (P07951), TPM2_MOUSE (P58774), TPM2_RABIT (P58776), TPM2_RAT(P58775), TPM3_BOVIN (Q5KR47), TPM3_CAEEL (Q27249), TPM3_HUMAN (P06753), TPM3_MOUSE (P21107), TPM3_PIG(A1XQV4), TPM3_RAT(Q63610), TPM4_DROME (P49455), TPM4_HORSE (P02561), TPM4_HUMAN (P67936), TPM4_MOUSE (Q6IRU2), TPM4_PIG(P67937), TPM4_RAT(P09495), TPMM_TRICO (P15846), TPM_ACAVI (O01673), TPM_ANISI (Q9NAS5), TPM_BLAGE (Q9NG56), TPM_BRABE (Q9NDS0), TPM_CAEBR (Q60UW4), TPM_CHAFE (Q9N2R3), TPM_CHIKI (O96764), TPM_CHIOP (A2V735), TPM_CHLNI (O02389), TPM_DERFA (Q23939), TPM_DERPT (O18416), TPM_ERISI (A4URH3), TPM_HALDV (Q9GZ71), TPM_HALRU (Q25145), TPM_HOMAM (O44119), TPM_LEPDS (Q9NFZ4), TPM_LEPSA (Q8T380), TPM_LOCMI (P31816), TPM_MACRS (V5NBV4), TPM_METEN (Q25456), TPM_MIMNO (Q9GZ69), TPM_MYTED (Q25457), TPM_MYTGA (P91958), TPM_ONCVO (Q25632), TPM_PANBO (P86704), TPM_PANST (O61379), TPM_PENAT (Q3Y8M6), TPM_PENMO (A1KYZ2), TPM_PERFU (Q8T6L5), TPM_PERVI (Q9GZ70), TPM_PORPE (M1H607), TPM_PSOOV (Q3BJY7), TPM_SCHHA (Q26503), TPM_SCHJA (Q26519), TPM_TRIPS (Q8WR63), TPM_TRISP (Q95VA8)» more
|
UniProtKB/Swiss-Prot False negative sequences |
11 sequences
TPM1_CIOIN (Q07068), TPM1_HYDVU (P39921), TPM1_PODCA (P41114), TPM2_PODCA (Q9U5M4), TPM2_SCHMA (P42638), TPM_CLOSI (Q23758), TPM_CORAP (O97192), TPM_ECHGR (O16127), TPM_ECHMU (Q95PU1), TPM_HAELO (Q8IT89), TPM_RHIMP (O97162)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
TPM_TURCO (Q7M3Y8) |
PDB [Detailed view] |
21 PDB
1C1G; 2D3E; 2EFR; 2EFS; 2TMA; 2W49; 2W4U; 6X5Z; 7KO4; 7KO5; 7KO7; 7KON; 7KOR; 7NEP; 7UTI; 7UTL; 8DD0; 8EFH; 8EFI; 8ENC; 8Q4G » more |