Flaviviridae

Molecular biology

VIRION

Enveloped, spherical, about 50 nm in diameter.

GENOME

Monopartite, linear, ssRNA(+) genome of about 10-12 kb. The virion RNA is infectious and serves as both the genome and the viral messenger RNA.

GENE EXPRESSION

The whole genome is translated in a polyprotein, which is processed co- and posttranslationally by host and viral proteases.

REPLICATION

CYTOPLASMIC

  1. Virus attaches to host receptors and is endocytosed into vesicles in the host cell.
  2. Fusion of virus membrane with the vesicle membrane; RNA genome is released into the cytoplasm.
  3. The positive-sense genomic ssRNA is translated into a polyprotein, which is cleaved into all structural and non structural proteins.
  4. Replication takes place at the surface of endoplasmic reticulum. A negative-sense complementary ssRNA is synthesized using the genomic RNA as a template.
  5. New genomic RNA is synthesized using the negative-sense RNA as a template.
  6. Virus assembly occurs at the endoplasmic reticulum. The virion buds at the endoplasmic reticulum, is transported to the Golgi apparatus, and then bud from the cell membrane.

Matching UniProtKB/Swiss-Prot entries

76 entries grouped by species (reorder by proteins)

Only complete proteome entries are shown (view all 81 entries)

2 entries

Hepatitis C virus genotype 1a (isolate 1) (HCV)

Select_all Deselect_all  
F_HCV1F protein (Frameshifted protein) (Alternate reading frame protein/F-protein) ...
POLG_HCV1Genome polyprotein

2 entries

Hepatitis C virus genotype 1a (isolate H) (HCV)

Select_all Deselect_all  
F_HCVHF protein (Frameshifted protein) (Alternate reading frame protein/F-protein) ...
POLG_HCVHGenome polyprotein

1 entry

Bovine viral diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus)


POLG_BVDVNGenome polyprotein

1 entry

Bovine viral diarrhea virus (strain CP7) (BVDV) (Mucosal disease virus)


POLG_BVDVCGenome polyprotein

1 entry

Bovine viral diarrhea virus (strain SD-1) (BVDV) (Mucosal disease virus)


POLG_BVDVSGenome polyprotein

1 entry

Classical swine fever virus (strain Alfort) (CSFV) (Hog cholera virus)


POLG_CSFVAGenome polyprotein

1 entry

Classical swine fever virus (strain Brescia) (CSFV) (Hog cholera virus)


POLG_CSFVBGenome polyprotein

1 entry

Dengue virus type 1 (strain Brazil/97-11/1997) (DENV-1)


POLG_DEN1BGenome polyprotein

1 entry

Dengue virus type 1 (strain Nauru/West Pac/1974) (DENV-1)


POLG_DEN1WGenome polyprotein

1 entry

Dengue virus type 1 (strain Singapore/S275/1990) (DENV-1)


POLG_DEN1SGenome polyprotein

1 entry

Dengue virus type 2 (isolate Thailand/0168/1979) (DENV-2)


POLG_DEN28Genome polyprotein

1 entry

Dengue virus type 2 (strain 16681-PDK53) (DENV-2)


POLG_DEN27Genome polyprotein

1 entry

Dengue virus type 2 (strain Jamaica/1409/1983) (DENV-2)


POLG_DEN2JGenome polyprotein

1 entry

Dengue virus type 2 (strain Peru/IQT2913/1996) (DENV-2)


POLG_DEN2QGenome polyprotein

1 entry

Dengue virus type 2 (strain Puerto Rico/PR159-S1/1969) (DENV-2)


POLG_DEN2PGenome polyprotein

1 entry

Dengue virus type 2 (strain Thailand/16681/1984) (DENV-2)


POLG_DEN26Genome polyprotein

1 entry

Dengue virus type 2 (strain Thailand/NGS-C/1944) (DENV-2)


POLG_DEN2NGenome polyprotein

1 entry

Dengue virus type 3 (strain China/80-2/1980) (DENV-3)


POLG_DEN3CGenome polyprotein

1 entry

Dengue virus type 3 (strain Martinique/1243/1999) (DENV-3)


POLG_DEN3MGenome polyprotein

1 entry

Dengue virus type 3 (strain Philippines/H87/1956) (DENV-3)


POLG_DEN3PGenome polyprotein

1 entry

Dengue virus type 3 (strain Singapore/8120/1995) (DENV-3)


POLG_DEN3IGenome polyprotein

1 entry

Dengue virus type 3 (strain Sri Lanka/1266/2000) (DENV-3)


POLG_DEN3SGenome polyprotein

1 entry

Dengue virus type 4 (strain Dominica/814669/1981) (DENV-4)


POLG_DEN4DGenome polyprotein

1 entry

Dengue virus type 4 (strain Philippines/H241/1956) (DENV-4)


POLG_DEN4PGenome polyprotein

1 entry

Dengue virus type 4 (strain Singapore/8976/1995) (DENV-4)


POLG_DEN4SGenome polyprotein

1 entry

Dengue virus type 4 (strain Thailand/0348/1991) (DENV-4)


POLG_DEN4TGenome polyprotein

1 entry

Dengue virus type 4 (strain Thailand/0476/1997) (DENV-4)


POLG_DEN4HGenome polyprotein

1 entry

Hepatitis C virus genotype 1b (isolate BK) (HCV)


POLG_HCVBKGenome polyprotein

1 entry

Hepatitis C virus genotype 1b (isolate Con1) (HCV)


POLG_HCVCOGenome polyprotein

1 entry

Hepatitis C virus genotype 1b (isolate HC-J1) (HCV)


POLG_HCVJ1Genome polyprotein

1 entry

Hepatitis C virus genotype 1b (isolate HC-JT) (HCV)


POLG_HCVJTGenome polyprotein

1 entry

Hepatitis C virus genotype 1b (isolate HCR6) (HCV)


POLG_HCVR6Genome polyprotein

1 entry

Hepatitis C virus genotype 1b (isolate Japanese) (HCV)


POLG_HCVJAGenome polyprotein

1 entry

Hepatitis C virus genotype 1b (isolate Taiwan) (HCV)


POLG_HCVTWGenome polyprotein

1 entry

Hepatitis C virus genotype 1b (strain HC-J4) (HCV)


POLG_HCVJ4Genome polyprotein

1 entry

Hepatitis C virus genotype 1c (isolate HC-G9) (HCV)


POLG_HCVH9Genome polyprotein

1 entry

Hepatitis C virus genotype 1c (isolate India) (HCV)


POLG_HCVINGenome polyprotein

1 entry

Hepatitis C virus genotype 2a (isolate HC-J6) (HCV)


POLG_HCVJ6Genome polyprotein

1 entry

Hepatitis C virus genotype 2a (isolate JFH-1) (HCV)


POLG_HCVJFGenome polyprotein

1 entry

Hepatitis C virus genotype 2b (isolate HC-J8) (HCV)


POLG_HCVJ8Genome polyprotein

1 entry

Hepatitis C virus genotype 2b (isolate JPUT971017) (HCV)


POLG_HCVJPGenome polyprotein

1 entry

Hepatitis C virus genotype 2c (isolate BEBE1) (HCV)


POLG_HCVBBGenome polyprotein

1 entry

Hepatitis C virus genotype 3a (isolate NZL1) (HCV)


POLG_HCVNZGenome polyprotein

1 entry

Hepatitis C virus genotype 3a (isolate k3a) (HCV)


POLG_HCVK3Genome polyprotein

1 entry

Hepatitis C virus genotype 3b (isolate Tr-Kj) (HCV)


POLG_HCVTRGenome polyprotein

1 entry

Hepatitis C virus genotype 3k (isolate JK049) (HCV)


POLG_HCVJKGenome polyprotein

1 entry

Hepatitis C virus genotype 4a (isolate ED43) (HCV)


POLG_HCVEDGenome polyprotein

1 entry

Hepatitis C virus genotype 5a (isolate EUH1480) (HCV)


POLG_HCVEVGenome polyprotein

1 entry

Hepatitis C virus genotype 5a (isolate SA13) (HCV)


POLG_HCVSAGenome polyprotein

1 entry

Hepatitis C virus genotype 6a (isolate 6a33) (HCV)


POLG_HCV6AGenome polyprotein

1 entry

Hepatitis C virus genotype 6a (isolate EUHK2) (HCV)


POLG_HCVEUGenome polyprotein

1 entry

Hepatitis C virus genotype 6b (isolate Th580) (HCV)


POLG_HCVT5Genome polyprotein

1 entry

Hepatitis C virus genotype 6g (isolate JK046) (HCV)


POLG_HCVJLGenome polyprotein

1 entry

Japanese encephalitis virus (strain Jaoars982)


POLG_JAEVJGenome polyprotein

1 entry

Japanese encephalitis virus (strain SA(v))


POLG_JAEV5Genome polyprotein

1 entry

Japanese encephalitis virus (strain SA-14)


POLG_JAEV1Genome polyprotein

1 entry

Kunjin virus (strain MRM61C)


POLG_KUNJMGenome polyprotein

1 entry

Langat virus (strain TP21)


POLG_LANVTGenome polyprotein

1 entry

Mosquito cell fusing agent (CFA flavivirus)


POLG_MCFAGenome polyprotein

1 entry

Murray valley encephalitis virus (strain MVE-1-51) (MVEV)


POLG_MVEV5Genome polyprotein

1 entry

Tick-borne encephalitis virus (strain Hypr) (TBEV)


POLG_TBEVHGenome polyprotein

1 entry

Tick-borne encephalitis virus European subtype (strain Neudoerfl) (NEUV) (Neudoerfl virus)


POLG_TBEVWGenome polyprotein

1 entry

Tick-borne encephalitis virus Far Eastern subtype (strain Sofjin) (SOFV) (Sofjin virus)


POLG_TBEVSGenome polyprotein

1 entry

Tick-borne powassan virus (strain LB) (POWV) (Powassan virus)


POLG_POWVLGenome polyprotein

1 entry

West Nile virus (WNV)


POLG_WNVGenome polyprotein

1 entry

Yellow fever virus (isolate Angola/14FA/1971) (YFV)


POLG_YEFVNGenome polyprotein

1 entry

Yellow fever virus (isolate Ethiopia/Couma/1961) (YFV)


POLG_YEFVEGenome polyprotein

1 entry

Yellow fever virus (isolate Ivory Coast/1999) (YFV)


POLG_YEFVCGenome polyprotein

1 entry

Yellow fever virus (isolate Ivory Coast/85-82H/1982) (YFV)


POLG_YEFVIGenome polyprotein

1 entry

Yellow fever virus (isolate Uganda/A7094A4/1948) (YFV)


POLG_YEFVUGenome polyprotein

1 entry

Yellow fever virus (strain 17D vaccine) (YFV)


POLG_YEFV1Genome polyprotein

1 entry

Yellow fever virus (strain French neurotropic vaccine FNV) (YFV)


POLG_YEFVFGenome polyprotein

1 entry

Yellow fever virus (strain Ghana/Asibi/1927) (YFV)


POLG_YEFVAGenome polyprotein

1 entry

Yellow fever virus (strain Trinidad/TRINID79A/1979) (YFV)


POLG_YEFVTGenome polyprotein